init research

2026-02-08 11:20:43 -10:00
commit bdf064f54d
3041 changed files with 1592200 additions and 0 deletions
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+github: cnuernber
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+name: Run tests in devcontainer
+
+on:
+  push:
+
+jobs:
+  run-tests:
+
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v4
+    
+    - name: run tests
+      uses: devcontainers/ci@v0.3
+      with:    
+         runCmd: bash -c 'scripts/get-data.sh && scripts/run-tests'
+         push: never
+
+
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+name: Automated tests
+
+on:
+  push:
+
+jobs:
+  test:
+    strategy:
+      fail-fast: false
+      matrix:
+        jdk-version: ["11", "17", "21"]
+    runs-on: ubuntu-22.04
+    steps:
+    - uses: actions/checkout@v3
+    - name: Restore cached dependencies
+      uses: actions/cache/restore@v3
+      with:
+        path: |
+           ~/.m2/repository
+           ~/.gitlibs
+           ~/.deps.clj
+        key: cljdeps-${{ hashFiles('deps.edn') }}
+    - name: Additional dependencies
+      run: |
+        DEBIAN_FRONTEND=noninteractive sudo -E apt-get install -y libopenblas-dev lz4
+        wget -O- https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | gpg --dearmor | sudo tee /usr/share/keyrings/oneapi-archive-keyring.gpg > /dev/null
+        echo "deb [signed-by=/usr/share/keyrings/oneapi-archive-keyring.gpg] https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
+        sudo apt update
+        sudo apt install intel-oneapi-mkl
+    - name: Java setup
+      uses: actions/setup-java@v3
+      with:
+        distribution: 'temurin'
+        java-version: ${{ matrix.jdk-version }}
+    - name: Setup Clojure
+      uses: DeLaGuardo/setup-clojure@12.1
+      with:
+        cli: 1.11.1.1413
+    - name: Run automated tests
+      run: |
+        scripts/get-data.sh
+        scripts/run-tests
+    - name: Cache dependencies
+      uses: actions/cache@v3
+      with:
+        path: |
+           ~/.m2/repository
+           ~/.gitlibs
+           ~/.deps.clj
+        key: cljdeps-${{ hashFiles('deps.edn') }}
+        restore-keys: cljdeps-